Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 AL158211.3-201ENST00000607385 239 ntBASIC16.09■□□□□ 0.17
RFX6Q8HWS3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 AC100757.3-201ENST00000622361 1406 ntBASIC16.09■□□□□ 0.17
RFX6Q8HWS3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.09■□□□□ 0.17
RFX6Q8HWS3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFX6Q8HWS3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AC025181.2-201ENST00000606994 802 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AL844908.2-201ENST00000609461 460 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 KRT18P28-201ENST00000453838 1332 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AL513477.1-201ENST00000602865 2407 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AC099063.4-201ENST00000641099 1602 ntBASIC16.08■□□□□ 0.16
RFX6Q8HWS3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFX6Q8HWS3 AC106881.1-201ENST00000605849 3329 ntBASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TOMM22P5-201ENST00000416399 439 ntBASIC16.07■□□□□ 0.16
RFX6Q8HWS3 GHSR-202ENST00000427970 912 ntBASIC16.07■□□□□ 0.16
RFX6Q8HWS3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.07■□□□□ 0.16
RFX6Q8HWS3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RFX6Q8HWS3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms