Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAB11FIP4Q86YS3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 DGCR5-201ENST00000399539 862 ntBASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 PIN1P1-201ENST00000412108 996 ntBASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC107373.2-201ENST00000607735 490 ntBASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB11FIP4Q86YS3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 AC126365.1-201ENST00000578585 1514 ntBASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 AC067930.6-201ENST00000623257 4947 ntBASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB11FIP4Q86YS3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 AL359711.2-201ENST00000563105 872 ntBASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 AC093726.1-201ENST00000608064 963 ntBASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 REXO1L2P-201ENST00000425429 2069 ntBASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB11FIP4Q86YS3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 DRD5P1-201ENST00000456605 1438 ntBASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 AP000845.1-201ENST00000581677 2131 ntBASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.07■□□□□ 0.48
RAB11FIP4Q86YS3 CRB3P1-201ENST00000449338 276 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms