Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDDC2Q7Z4H3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
HDDC2Q7Z4H3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HDDC2Q7Z4H3 CETN4P-206ENST00000642099 2168 ntBASIC14.15□□□□□ -0.15
HDDC2Q7Z4H3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 KRT8P12-202ENST00000472924 1397 ntBASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC136604.1-201ENST00000418535 575 ntBASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 MTND6P24-201ENST00000440466 518 ntBASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
HDDC2Q7Z4H3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.13□□□□□ -0.15
HDDC2Q7Z4H3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms