Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC006058.4-201ENST00000624016 1670 ntBASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 PIN1P1-201ENST00000412108 996 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AC009477.1-201ENST00000452936 217 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ZNF890P-202ENST00000530367 1156 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AL512361.1-201ENST00000554200 418 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AC044860.1-202ENST00000559481 777 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AC010336.2-201ENST00000564226 506 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CHMP1BQ7LBR1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.33□□□□□ -0.11
CHMP1BQ7LBR1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP1BQ7LBR1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP1BQ7LBR1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.33□□□□□ -0.11
CHMP1BQ7LBR1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHMP1BQ7LBR1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 SERBP1P5-201ENST00000510079 1181 ntBASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 CICP14-201ENST00000629111 2732 ntBASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP1BQ7LBR1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms