Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AC018442.1-201ENST00000421439 2061 ntBASIC17.36■□□□□ 0.37
SHC4Q6S5L8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 AC055876.3-201ENST00000431496 288 ntBASIC17.36■□□□□ 0.37
SHC4Q6S5L8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 AC138649.4-201ENST00000612222 287 ntBASIC17.36■□□□□ 0.37
SHC4Q6S5L8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 LILRP1-201ENST00000444199 1370 ntBASIC17.36■□□□□ 0.37
SHC4Q6S5L8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHC4Q6S5L8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AL360270.3-201ENST00000609118 1348 ntBASIC17.35■□□□□ 0.37
SHC4Q6S5L8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AC007787.1-201ENST00000588095 1583 ntBASIC17.35■□□□□ 0.37
SHC4Q6S5L8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC4Q6S5L8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHC4Q6S5L8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms