Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC000095.1-201ENST00000603208 874 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC023511.2-201ENST00000618803 211 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC004461.2-201ENST00000629517 803 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC005912.2-201ENST00000619492 2400 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 AC140479.7-201ENST00000636301 2332 ntBASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.92□□□□□ -0.02
LETMD1Q6P1Q0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FAM86GP-201ENST00000448322 971 ntBASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AC067863.1-201ENST00000494933 530 ntBASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AL590560.3-201ENST00000623350 461 ntBASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
LETMD1Q6P1Q0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LETMD1Q6P1Q0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms