Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 AC016694.1-201ENST00000434179 700 ntBASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 CTBP2P5-201ENST00000454986 1264 ntBASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
H3F3CQ6NXT2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 AC093525.8-201ENST00000624099 1342 ntBASIC14.27□□□□□ -0.12
H3F3CQ6NXT2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 NUS1P3-201ENST00000423502 862 ntBASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 FTH1P14-201ENST00000482930 551 ntBASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AC106760.1-201ENST00000508690 800 ntBASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 GNRHR2-203ENST00000581100 1187 ntBASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 BX539320.1-201ENST00000623759 877 ntBASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.27□□□□□ -0.13
H3F3CQ6NXT2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
H3F3CQ6NXT2 AC092384.3-202ENST00000564646 2873 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms