Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 AL157414.3-201ENST00000624276 1954 ntBASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.3■□□□□ 0.52
CREB3L3Q68CJ9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AL360270.3-201ENST00000609118 1348 ntBASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC093525.8-201ENST00000624099 1342 ntBASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AL138799.1-201ENST00000448213 1675 ntBASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC098850.1-201ENST00000419919 790 ntBASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AL353779.1-201ENST00000434793 351 ntBASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CREB3L3Q68CJ9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 SPCS2P1-201ENST00000561636 679 ntBASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 AL096865.1-201ENST00000606796 927 ntBASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CREB3L3Q68CJ9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms