Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 AC011495.1-201ENST00000498085 584 ntBASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 CR383656.12-201ENST00000549567 513 ntBASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 BRI3BPP1-201ENST00000594224 787 ntBASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 C18orf15-201ENST00000623680 2534 ntBASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TTC39BQ5VTQ0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TTC39BQ5VTQ0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 DGCR5-201ENST00000399539 862 ntBASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 WASH4P-201ENST00000564273 1246 ntBASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 MIR8072-201ENST00000614241 80 ntBASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC39BQ5VTQ0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 AC098850.1-201ENST00000419919 790 ntBASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.07■□□□□ 0.16
TTC39BQ5VTQ0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms