Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC084364.1-201ENST00000551967 1556 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CRYGEP-201ENST00000412192 528 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC108751.1-201ENST00000490852 363 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 KRT18P58-201ENST00000527480 1120 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC106730.1-201ENST00000566722 1090 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AL049840.3-201ENST00000602669 611 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC027601.4-201ENST00000611259 610 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC117500.6-201ENST00000624871 588 ntBASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ANKRD55Q3KP44 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC140658.5-201ENST00000438532 169 ntBASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 UNC93B6-202ENST00000528242 690 ntBASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 PTENP1-202ENST00000532280 3996 ntBASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 AC104109.2-201ENST00000602919 1418 ntBASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ANKRD55Q3KP44 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms