Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 Z98259.2-201ENST00000641583 609 ntBASIC17.35■□□□□ 0.37
SREBF2Q12772 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.35■□□□□ 0.37
SREBF2Q12772 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SREBF2Q12772 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREBF2Q12772 AC124067.4-201ENST00000519691 2379 ntBASIC17.35■□□□□ 0.37
SREBF2Q12772 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SREBF2Q12772 AL583805.1-201ENST00000391389 531 ntBASIC17.34■□□□□ 0.37
SREBF2Q12772 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SREBF2Q12772 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.34■□□□□ 0.37
SREBF2Q12772 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.34■□□□□ 0.37
SREBF2Q12772 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.34■□□□□ 0.37
SREBF2Q12772 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.34■□□□□ 0.37
SREBF2Q12772 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.34■□□□□ 0.37
SREBF2Q12772 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.34■□□□□ 0.37
SREBF2Q12772 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SREBF2Q12772 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 AC006058.4-201ENST00000624016 1670 ntBASIC17.34■□□□□ 0.37
SREBF2Q12772 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.34■□□□□ 0.37
SREBF2Q12772 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.34■□□□□ 0.37
SREBF2Q12772 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREBF2Q12772 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SREBF2Q12772 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.33■□□□□ 0.37
SREBF2Q12772 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.33■□□□□ 0.37
SREBF2Q12772 INE2-201ENST00000630399 1874 ntBASIC17.33■□□□□ 0.37
SREBF2Q12772 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SREBF2Q12772 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREBF2Q12772 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.33■□□□□ 0.37
SREBF2Q12772 AC011840.2-201ENST00000563063 1520 ntBASIC17.33■□□□□ 0.37
SREBF2Q12772 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SREBF2Q12772 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SREBF2Q12772 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.33■□□□□ 0.36
SREBF2Q12772 AL627422.1-201ENST00000434104 580 ntBASIC17.33■□□□□ 0.36
SREBF2Q12772 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.33■□□□□ 0.36
SREBF2Q12772 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.33■□□□□ 0.36
SREBF2Q12772 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.33■□□□□ 0.36
SREBF2Q12772 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.33■□□□□ 0.36
SREBF2Q12772 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 MEG3_2.1-201ENST00000611456 105 ntBASIC17.33■□□□□ 0.36
SREBF2Q12772 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.33■□□□□ 0.36
SREBF2Q12772 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SREBF2Q12772 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREBF2Q12772 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
SREBF2Q12772 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SREBF2Q12772 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SREBF2Q12772 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SREBF2Q12772 AC136759.1-202ENST00000530858 2194 ntBASIC17.32■□□□□ 0.36
SREBF2Q12772 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SREBF2Q12772 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms