Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKL1Q00532 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 AC138969.3-201ENST00000546612 1459 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AC138932.2-201ENST00000548268 1459 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AC126755.4-201ENST00000549796 1459 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDKL1Q00532 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 TREML5P-201ENST00000421694 576 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 KRT18P43-201ENST00000469825 1281 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.22■□□□□ 0.03
CDKL1Q00532 LINC01115-203ENST00000606068 577 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AF228730.6-201ENST00000641497 218 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AL645728.2-202ENST00000641679 227 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AC084121.3-201ENST00000641716 218 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 AL109936.8-201ENST00000641772 604 ntBASIC15.22■□□□□ 0.03
CDKL1Q00532 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKL1Q00532 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDKL1Q00532 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKL1Q00532 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKL1Q00532 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKL1Q00532 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 AGAP7P-201ENST00000582299 2062 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 AGAP14-201ENST00000624701 2060 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 BTBD7P1-201ENST00000447253 1453 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKL1Q00532 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 MIR943-201ENST00000401286 94 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKL1Q00532 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 AC241585.1-201ENST00000433527 519 ntBASIC15.21■□□□□ 0.03
CDKL1Q00532 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.21■□□□□ 0.03
CDKL1Q00532 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKL1Q00532 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
CDKL1Q00532 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKL1Q00532 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKL1Q00532 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKL1Q00532 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKL1Q00532 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKL1Q00532 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDKL1Q00532 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.21■□□□□ 0.02
CDKL1Q00532 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDKL1Q00532 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CDKL1Q00532 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.21■□□□□ 0.02
CDKL1Q00532 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.21■□□□□ 0.02
CDKL1Q00532 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDKL1Q00532 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms