Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 FO393414.2-201ENST00000405153 598 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2D3P61077 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
UBE2D3P61077 MROH4P-201ENST00000431302 1578 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 DNAJB3-201ENST00000446806 729 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2D3P61077 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
UBE2D3P61077 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.05□□□□□ -0.64
UBE2D3P61077 AC005829.1-201ENST00000570002 483 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 AC105021.1-202ENST00000570572 669 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2D3P61077 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.05□□□□□ -0.64
UBE2D3P61077 AC018529.1-201ENST00000613063 361 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 AL356585.2-201ENST00000625078 2396 ntBASIC11.05□□□□□ -0.64
UBE2D3P61077 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D3P61077 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D3P61077 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D3P61077 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D3P61077 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D3P61077 MYO15B-237ENST00000642007 4893 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 MBLAC2-202ENST00000514906 1936 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
UBE2D3P61077 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 RPL5P21-201ENST00000404620 815 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 SPDYE17-201ENST00000412399 783 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2D3P61077 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2D3P61077 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2D3P61077 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2D3P61077 AL513210.1-201ENST00000629608 234 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 AC091951.1-201ENST00000512854 2465 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D3P61077 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D3P61077 CICP8-201ENST00000455800 2813 ntBASIC11.04□□□□□ -0.64
UBE2D3P61077 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D3P61077 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms