Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 MRPL20P1-201ENST00000400819 433 ntBASIC13.3□□□□□ -0.28
AP3S2P59780 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
AP3S2P59780 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 DUSP5P1-201ENST00000441325 1139 ntBASIC13.3□□□□□ -0.28
AP3S2P59780 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S2P59780 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S2P59780 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S2P59780 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S2P59780 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.3□□□□□ -0.28
AP3S2P59780 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.3□□□□□ -0.28
AP3S2P59780 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
AP3S2P59780 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
AP3S2P59780 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.3□□□□□ -0.28
AP3S2P59780 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S2P59780 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
AP3S2P59780 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 AC005332.1-201ENST00000577698 1310 ntBASIC13.3□□□□□ -0.28
AP3S2P59780 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
AP3S2P59780 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
AP3S2P59780 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.3□□□□□ -0.28
AP3S2P59780 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.3□□□□□ -0.28
AP3S2P59780 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
AP3S2P59780 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
AP3S2P59780 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.29□□□□□ -0.28
AP3S2P59780 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 AC104076.2-201ENST00000448912 469 ntBASIC13.29□□□□□ -0.28
AP3S2P59780 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.29□□□□□ -0.28
AP3S2P59780 AC136632.2-201ENST00000512891 861 ntBASIC13.29□□□□□ -0.28
AP3S2P59780 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.29□□□□□ -0.28
AP3S2P59780 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.29□□□□□ -0.28
AP3S2P59780 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.29□□□□□ -0.28
AP3S2P59780 ACTL9-202ENST00000612068 1252 ntBASIC13.29□□□□□ -0.28
AP3S2P59780 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 AL122018.1-201ENST00000446607 2310 ntBASIC13.29□□□□□ -0.28
AP3S2P59780 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.29□□□□□ -0.28
AP3S2P59780 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
AP3S2P59780 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
AP3S2P59780 FP325330.2-201ENST00000624219 5630 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 AC018529.2-202ENST00000611482 3087 ntBASIC13.28□□□□□ -0.28
AP3S2P59780 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S2P59780 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
AP3S2P59780 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms