Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 AC011477.6-201ENST00000604980 1927 ntBASIC13.33□□□□□ -0.28
HCFC1P51610 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.33□□□□□ -0.28
HCFC1P51610 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HCFC1P51610 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HCFC1P51610 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
HCFC1P51610 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.32□□□□□ -0.28
HCFC1P51610 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.32□□□□□ -0.28
HCFC1P51610 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.32□□□□□ -0.28
HCFC1P51610 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.32□□□□□ -0.28
HCFC1P51610 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 MIR4783-201ENST00000580343 82 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 AC026740.1-201ENST00000607068 791 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.32□□□□□ -0.28
HCFC1P51610 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.32□□□□□ -0.28
HCFC1P51610 MIR4722-201ENST00000578292 60 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 AC244157.2-201ENST00000616239 1006 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.32□□□□□ -0.28
HCFC1P51610 AC112504.1-201ENST00000623415 1841 ntBASIC13.32□□□□□ -0.28
HCFC1P51610 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HCFC1P51610 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 AP003680.1-201ENST00000598970 3660 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 AC008132.1-202ENST00000342005 1389 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.31□□□□□ -0.28
HCFC1P51610 FGFR3P5-201ENST00000564496 886 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.31□□□□□ -0.28
HCFC1P51610 RN7SL774P-201ENST00000577467 290 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 MIR3907-201ENST00000579424 151 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.31□□□□□ -0.28
HCFC1P51610 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.31□□□□□ -0.28
HCFC1P51610 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 AC144831.1-201ENST00000573312 2656 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms