Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 FAM58CP-201ENST00000435741 640 ntBASIC13.65□□□□□ -0.22
SOX2P48431 SPCS2P4-201ENST00000436160 681 ntBASIC13.65□□□□□ -0.22
SOX2P48431 SPDYE11-202ENST00000450699 704 ntBASIC13.65□□□□□ -0.22
SOX2P48431 RN7SL589P-201ENST00000481268 310 ntBASIC13.65□□□□□ -0.22
SOX2P48431 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 FAM86C2P-203ENST00000528684 1004 ntBASIC13.65□□□□□ -0.22
SOX2P48431 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SOX2P48431 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX2P48431 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX2P48431 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 SPDYE9P-201ENST00000570642 692 ntBASIC13.65□□□□□ -0.22
SOX2P48431 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SOX2P48431 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 SPDYE10P-202ENST00000612005 668 ntBASIC13.65□□□□□ -0.22
SOX2P48431 SPDYE8P-202ENST00000612377 668 ntBASIC13.65□□□□□ -0.22
SOX2P48431 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SOX2P48431 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
SOX2P48431 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 ACE3P-201ENST00000423435 1973 ntBASIC13.65□□□□□ -0.22
SOX2P48431 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.65□□□□□ -0.22
SOX2P48431 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SOX2P48431 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.65□□□□□ -0.22
SOX2P48431 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SOX2P48431 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.64□□□□□ -0.23
SOX2P48431 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 AC084364.1-201ENST00000551967 1556 ntBASIC13.64□□□□□ -0.23
SOX2P48431 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SOX2P48431 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SOX2P48431 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.64□□□□□ -0.23
SOX2P48431 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
SOX2P48431 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.64□□□□□ -0.23
SOX2P48431 AC243562.1-201ENST00000560672 389 ntBASIC13.64□□□□□ -0.23
SOX2P48431 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.64□□□□□ -0.23
SOX2P48431 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
SOX2P48431 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SOX2P48431 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms