Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFX3P48380 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RFX3P48380 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RFX3P48380 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
RFX3P48380 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFX3P48380 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFX3P48380 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFX3P48380 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.57□□□□□ -0.08
RFX3P48380 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.57□□□□□ -0.08
RFX3P48380 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.57□□□□□ -0.08
RFX3P48380 AC025048.3-201ENST00000590609 569 ntBASIC14.57□□□□□ -0.08
RFX3P48380 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 AC005702.4-201ENST00000618393 416 ntBASIC14.57□□□□□ -0.08
RFX3P48380 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFX3P48380 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFX3P48380 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.57□□□□□ -0.08
RFX3P48380 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RFX3P48380 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 AC023157.3-201ENST00000619086 2088 ntBASIC14.56□□□□□ -0.08
RFX3P48380 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RFX3P48380 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.56□□□□□ -0.08
RFX3P48380 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.56□□□□□ -0.08
RFX3P48380 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.56□□□□□ -0.08
RFX3P48380 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.56□□□□□ -0.08
RFX3P48380 LINC01115-203ENST00000606068 577 ntBASIC14.56□□□□□ -0.08
RFX3P48380 AF228730.6-201ENST00000641497 218 ntBASIC14.56□□□□□ -0.08
RFX3P48380 AC084121.3-201ENST00000641716 218 ntBASIC14.56□□□□□ -0.08
RFX3P48380 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFX3P48380 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFX3P48380 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFX3P48380 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms