Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 ENPP7P14-201ENST00000621765 1040 ntBASIC16.32■□□□□ 0.2
BRCC3P46736 AL157414.3-201ENST00000624276 1954 ntBASIC16.32■□□□□ 0.2
BRCC3P46736 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
BRCC3P46736 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCC3P46736 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 MST1L-201ENST00000442552 2185 ntBASIC16.31■□□□□ 0.2
BRCC3P46736 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
BRCC3P46736 AL354989.2-201ENST00000435838 1540 ntBASIC16.31■□□□□ 0.2
BRCC3P46736 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
BRCC3P46736 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BRCC3P46736 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.31■□□□□ 0.2
BRCC3P46736 AC104457.1-201ENST00000401024 814 ntBASIC16.31■□□□□ 0.2
BRCC3P46736 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 HLA-K-203ENST00000430151 1046 ntBASIC16.31■□□□□ 0.2
BRCC3P46736 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BRCC3P46736 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BRCC3P46736 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.31■□□□□ 0.2
BRCC3P46736 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BRCC3P46736 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCC3P46736 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
BRCC3P46736 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BRCC3P46736 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCC3P46736 FAM86HP-204ENST00000513466 959 ntBASIC16.3■□□□□ 0.2
BRCC3P46736 AC022616.1-201ENST00000518688 554 ntBASIC16.3■□□□□ 0.2
BRCC3P46736 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCC3P46736 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
BRCC3P46736 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
BRCC3P46736 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.3■□□□□ 0.2
BRCC3P46736 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.3■□□□□ 0.2
BRCC3P46736 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BRCC3P46736 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.3■□□□□ 0.2
BRCC3P46736 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BRCC3P46736 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.29■□□□□ 0.2
BRCC3P46736 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
BRCC3P46736 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BRCC3P46736 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BRCC3P46736 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms