Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 AC006335.1-201ENST00000445200 547 ntBASIC19.41■□□□□ 0.7
ATP6V1AP38606 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 AC020922.3-201ENST00000595064 547 ntBASIC19.41■□□□□ 0.7
ATP6V1AP38606 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 AL353770.1-201ENST00000614915 403 ntBASIC19.41■□□□□ 0.7
ATP6V1AP38606 AL136295.7-201ENST00000619226 1200 ntBASIC19.41■□□□□ 0.7
ATP6V1AP38606 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V1AP38606 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V1AP38606 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 RN7SKP175-201ENST00000408472 289 ntBASIC19.4■□□□□ 0.7
ATP6V1AP38606 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 PUDPP3-201ENST00000445368 636 ntBASIC19.4■□□□□ 0.7
ATP6V1AP38606 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.4■□□□□ 0.7
ATP6V1AP38606 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 AC103988.2-201ENST00000561804 725 ntBASIC19.4■□□□□ 0.7
ATP6V1AP38606 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 AC002472.3-201ENST00000640124 621 ntBASIC19.4■□□□□ 0.7
ATP6V1AP38606 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V1AP38606 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V1AP38606 NKILA-202ENST00000614771 2598 ntBASIC19.39■□□□□ 0.7
ATP6V1AP38606 AC092127.1-201ENST00000567093 3455 ntBASIC19.39■□□□□ 0.7
ATP6V1AP38606 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP6V1AP38606 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ATP6V1AP38606 INE2-201ENST00000630399 1874 ntBASIC19.39■□□□□ 0.7
ATP6V1AP38606 AL157414.3-201ENST00000624276 1954 ntBASIC19.39■□□□□ 0.7
ATP6V1AP38606 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP6V1AP38606 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP6V1AP38606 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 RPL18P13-201ENST00000478088 569 ntBASIC19.39■□□□□ 0.69
ATP6V1AP38606 IQSEC3P1-201ENST00000538799 536 ntBASIC19.39■□□□□ 0.69
ATP6V1AP38606 AL160314.3-201ENST00000556041 767 ntBASIC19.39■□□□□ 0.69
ATP6V1AP38606 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 RN7SL555P-201ENST00000584742 339 ntBASIC19.39■□□□□ 0.69
ATP6V1AP38606 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP6V1AP38606 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP6V1AP38606 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP6V1AP38606 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP6V1AP38606 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms