Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SNCAP37840 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.78□□□□□ -0.36
SNCAP37840 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SNCAP37840 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
SNCAP37840 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 CICP8-201ENST00000455800 2813 ntBASIC12.77□□□□□ -0.36
SNCAP37840 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.77□□□□□ -0.36
SNCAP37840 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.77□□□□□ -0.36
SNCAP37840 MIR193BHG-211ENST00000641433 5365 ntBASIC12.77□□□□□ -0.36
SNCAP37840 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNCAP37840 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
SNCAP37840 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 AC112191.1-201ENST00000523689 701 ntBASIC12.77□□□□□ -0.37
SNCAP37840 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.77□□□□□ -0.37
SNCAP37840 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.77□□□□□ -0.37
SNCAP37840 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SNCAP37840 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.77□□□□□ -0.37
SNCAP37840 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SNCAP37840 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNCAP37840 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 AC131212.3-201ENST00000624087 4219 ntBASIC12.76□□□□□ -0.37
SNCAP37840 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SNCAP37840 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 AC098859.1-201ENST00000502915 1238 ntBASIC12.76□□□□□ -0.37
SNCAP37840 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.76□□□□□ -0.37
SNCAP37840 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.76□□□□□ -0.37
SNCAP37840 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.76□□□□□ -0.37
SNCAP37840 KRT19P2-202ENST00000557173 1012 ntBASIC12.76□□□□□ -0.37
SNCAP37840 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.76□□□□□ -0.37
SNCAP37840 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.76□□□□□ -0.37
SNCAP37840 AC068137.2-201ENST00000605408 478 ntBASIC12.76□□□□□ -0.37
SNCAP37840 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNCAP37840 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms