Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 PKD1P5-201ENST00000532415 10291 ntBASIC17.66■□□□□ 0.42
KRT2P35908 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 INTS4P2-202ENST00000614726 2019 ntBASIC17.66■□□□□ 0.42
KRT2P35908 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 AC087499.6-201ENST00000411576 835 ntBASIC17.66■□□□□ 0.42
KRT2P35908 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.66■□□□□ 0.42
KRT2P35908 AL353779.1-201ENST00000434793 351 ntBASIC17.66■□□□□ 0.42
KRT2P35908 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT2P35908 HMGN1P19-201ENST00000436976 333 ntBASIC17.66■□□□□ 0.42
KRT2P35908 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT2P35908 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.66■□□□□ 0.42
KRT2P35908 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT2P35908 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.66■□□□□ 0.42
KRT2P35908 CHCHD2P3-201ENST00000603038 451 ntBASIC17.66■□□□□ 0.42
KRT2P35908 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 AL359258.3-201ENST00000622910 2331 ntBASIC17.66■□□□□ 0.42
KRT2P35908 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT2P35908 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
KRT2P35908 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.66■□□□□ 0.42
KRT2P35908 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KRT2P35908 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 AC098850.1-201ENST00000419919 790 ntBASIC17.65■□□□□ 0.42
KRT2P35908 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT2P35908 API5-211ENST00000534695 560 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.65■□□□□ 0.42
KRT2P35908 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
KRT2P35908 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT2P35908 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.65■□□□□ 0.42
KRT2P35908 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.65■□□□□ 0.42
KRT2P35908 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.65■□□□□ 0.42
KRT2P35908 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.65■□□□□ 0.42
KRT2P35908 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 REXO1L2P-201ENST00000425429 2069 ntBASIC17.65■□□□□ 0.42
KRT2P35908 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
KRT2P35908 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
KRT2P35908 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT2P35908 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
KRT2P35908 AL138799.1-201ENST00000448213 1675 ntBASIC17.64■□□□□ 0.42
KRT2P35908 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.64■□□□□ 0.42
KRT2P35908 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
KRT2P35908 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KRT2P35908 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KRT2P35908 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms