Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS4P35443 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 SLC7A15P-201ENST00000424028 1363 ntBASIC13.61□□□□□ -0.23
THBS4P35443 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 AC087499.6-201ENST00000411576 835 ntBASIC13.61□□□□□ -0.23
THBS4P35443 AC074338.1-201ENST00000416825 156 ntBASIC13.61□□□□□ -0.23
THBS4P35443 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS4P35443 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
THBS4P35443 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
THBS4P35443 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.61□□□□□ -0.23
THBS4P35443 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
THBS4P35443 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THBS4P35443 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS4P35443 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
THBS4P35443 AL391825.1-201ENST00000457671 1364 ntBASIC13.6□□□□□ -0.23
THBS4P35443 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 MYO15B-237ENST00000642007 4893 ntBASIC13.6□□□□□ -0.23
THBS4P35443 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
THBS4P35443 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 RPL5P21-201ENST00000404620 815 ntBASIC13.6□□□□□ -0.23
THBS4P35443 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS4P35443 MEP1AP4-201ENST00000423244 1087 ntBASIC13.6□□□□□ -0.23
THBS4P35443 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.6□□□□□ -0.23
THBS4P35443 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.6□□□□□ -0.23
THBS4P35443 RPL13P2-201ENST00000440687 659 ntBASIC13.6□□□□□ -0.23
THBS4P35443 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.6□□□□□ -0.23
THBS4P35443 AP005018.1-201ENST00000525475 301 ntBASIC13.6□□□□□ -0.23
THBS4P35443 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 AC055876.2-201ENST00000531834 546 ntBASIC13.6□□□□□ -0.23
THBS4P35443 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
THBS4P35443 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.6□□□□□ -0.23
THBS4P35443 TP53TG3HP-202ENST00000569755 579 ntBASIC13.6□□□□□ -0.23
THBS4P35443 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.6□□□□□ -0.23
THBS4P35443 AC140912.1-201ENST00000577171 1054 ntBASIC13.6□□□□□ -0.23
THBS4P35443 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.6□□□□□ -0.23
THBS4P35443 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 CHCHD2P3-201ENST00000603038 451 ntBASIC13.6□□□□□ -0.23
THBS4P35443 AL607033.1-201ENST00000623900 1599 ntBASIC13.6□□□□□ -0.23
THBS4P35443 AC025048.6-201ENST00000634326 1161 ntBASIC13.6□□□□□ -0.23
THBS4P35443 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
THBS4P35443 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
THBS4P35443 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms