Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CHMP24386 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP24386 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP24386 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CHMP24386 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.48□□□□□ -0.09
CHMP24386 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 EEF1DP4-201ENST00000446006 880 ntBASIC14.48□□□□□ -0.09
CHMP24386 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 TERF1P3-201ENST00000505638 1227 ntBASIC14.48□□□□□ -0.09
CHMP24386 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.48□□□□□ -0.09
CHMP24386 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.48□□□□□ -0.09
CHMP24386 AC009118.2-201ENST00000613275 655 ntBASIC14.48□□□□□ -0.09
CHMP24386 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 BTBD7P1-201ENST00000447253 1453 ntBASIC14.48□□□□□ -0.09
CHMP24386 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP24386 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP24386 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP24386 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 MROH4P-201ENST00000431302 1578 ntBASIC14.47□□□□□ -0.09
CHMP24386 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP24386 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP24386 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP24386 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms