Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 AC103702.1-201ENST00000548801 2630 ntBASIC13.67□□□□□ -0.22
MSR1P21757 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
MSR1P21757 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.67□□□□□ -0.22
MSR1P21757 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MSR1P21757 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.67□□□□□ -0.22
MSR1P21757 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MSR1P21757 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MSR1P21757 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.67□□□□□ -0.22
MSR1P21757 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MSR1P21757 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.67□□□□□ -0.22
MSR1P21757 AC004890.2-204ENST00000481968 304 ntBASIC13.67□□□□□ -0.22
MSR1P21757 AC135586.1-201ENST00000539323 574 ntBASIC13.67□□□□□ -0.22
MSR1P21757 AC025181.2-201ENST00000606994 802 ntBASIC13.67□□□□□ -0.22
MSR1P21757 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.67□□□□□ -0.22
MSR1P21757 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.67□□□□□ -0.22
MSR1P21757 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MSR1P21757 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.66□□□□□ -0.22
MSR1P21757 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.66□□□□□ -0.22
MSR1P21757 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 PMS2P2-201ENST00000425039 1128 ntBASIC13.66□□□□□ -0.22
MSR1P21757 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 GHSR-202ENST00000427970 912 ntBASIC13.66□□□□□ -0.22
MSR1P21757 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 MEIS3P1-201ENST00000495167 958 ntBASIC13.66□□□□□ -0.22
MSR1P21757 AC093214.1-201ENST00000511688 1107 ntBASIC13.66□□□□□ -0.22
MSR1P21757 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 RFPL4AP1-201ENST00000530883 850 ntBASIC13.66□□□□□ -0.22
MSR1P21757 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 AC000095.1-201ENST00000603208 874 ntBASIC13.66□□□□□ -0.22
MSR1P21757 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.66□□□□□ -0.22
MSR1P21757 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.66□□□□□ -0.22
MSR1P21757 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MSR1P21757 AL645728.2-202ENST00000641679 227 ntBASIC13.66□□□□□ -0.22
MSR1P21757 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 WASH3P-207ENST00000560956 1394 ntBASIC13.66□□□□□ -0.22
MSR1P21757 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 MROH4P-201ENST00000431302 1578 ntBASIC13.66□□□□□ -0.22
MSR1P21757 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MSR1P21757 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MSR1P21757 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MSR1P21757 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms