Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL3P19876 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCL3P19876 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL3P19876 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL3P19876 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CXCL3P19876 FAM90A12P-201ENST00000519497 2375 ntBASIC12.99□□□□□ -0.33
CXCL3P19876 FAM90A24P-201ENST00000520792 2369 ntBASIC12.99□□□□□ -0.33
CXCL3P19876 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL3P19876 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.99□□□□□ -0.33
CXCL3P19876 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CXCL3P19876 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 KRT8P24-201ENST00000560290 1559 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 AC138969.3-201ENST00000546612 1459 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 AC138932.2-201ENST00000548268 1459 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 AC126755.4-201ENST00000549796 1459 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 AC068760.1-201ENST00000493579 1953 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.98□□□□□ -0.33
CXCL3P19876 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 RNU1-129P-201ENST00000384064 167 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCL3P19876 KRT18P21-201ENST00000515767 1272 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCL3P19876 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 U1.21-201ENST00000580816 167 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 AC116407.4-201ENST00000623319 1061 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 AL022326.1-202ENST00000641533 845 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.98□□□□□ -0.33
CXCL3P19876 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
CXCL3P19876 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.98□□□□□ -0.33
CXCL3P19876 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CXCL3P19876 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.98□□□□□ -0.33
CXCL3P19876 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CXCL3P19876 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CXCL3P19876 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.97□□□□□ -0.33
CXCL3P19876 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CXCL3P19876 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CXCL3P19876 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.97□□□□□ -0.33
CXCL3P19876 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.97□□□□□ -0.33
CXCL3P19876 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CXCL3P19876 TPSP2-201ENST00000561760 610 ntBASIC12.97□□□□□ -0.33
CXCL3P19876 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.97□□□□□ -0.33
CXCL3P19876 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CXCL3P19876 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CXCL3P19876 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms