Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AC093525.8-201ENST00000624099 1342 ntBASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 C1QBPP1-201ENST00000400117 770 ntBASIC15.61■□□□□ 0.09
HLA-DQB2P05538 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CRB3P1-201ENST00000449338 276 ntBASIC15.61■□□□□ 0.09
HLA-DQB2P05538 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.61■□□□□ 0.09
HLA-DQB2P05538 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 AC068587.6-202ENST00000641839 5619 ntBASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 NORAD-201ENST00000565493 5339 ntBASIC15.61■□□□□ 0.09
HLA-DQB2P05538 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQB2P05538 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 ACE3P-201ENST00000423435 1973 ntBASIC15.6■□□□□ 0.09
HLA-DQB2P05538 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 TP53TG3HP-202ENST00000569755 579 ntBASIC15.6■□□□□ 0.09
HLA-DQB2P05538 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 AC093813.1-201ENST00000605066 256 ntBASIC15.6■□□□□ 0.09
HLA-DQB2P05538 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DQB2P05538 KRT8P22-201ENST00000562317 1415 ntBASIC15.6■□□□□ 0.09
HLA-DQB2P05538 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DQB2P05538 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms