Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 AC002056.1-201ENST00000395613 760 ntBASIC12.99□□□□□ -0.33
CD74P04233 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.99□□□□□ -0.33
CD74P04233 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.99□□□□□ -0.33
CD74P04233 HCG4P8-203ENST00000443049 980 ntBASIC12.99□□□□□ -0.33
CD74P04233 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.99□□□□□ -0.33
CD74P04233 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
CD74P04233 RARRES2P8-201ENST00000566335 367 ntBASIC12.99□□□□□ -0.33
CD74P04233 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.99□□□□□ -0.33
CD74P04233 AC008267.7-201ENST00000624570 1194 ntBASIC12.99□□□□□ -0.33
CD74P04233 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.99□□□□□ -0.33
CD74P04233 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.98□□□□□ -0.33
CD74P04233 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CD74P04233 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CD74P04233 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CD74P04233 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 BCAR1-209ENST00000546196 1340 ntBASIC12.98□□□□□ -0.33
CD74P04233 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CD74P04233 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.98□□□□□ -0.33
CD74P04233 AC098831.1-202ENST00000438821 336 ntBASIC12.98□□□□□ -0.33
CD74P04233 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.98□□□□□ -0.33
CD74P04233 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.98□□□□□ -0.33
CD74P04233 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 AC099522.2-201ENST00000607001 744 ntBASIC12.98□□□□□ -0.33
CD74P04233 AC004877.2-201ENST00000623941 599 ntBASIC12.98□□□□□ -0.33
CD74P04233 AC148477.8-201ENST00000624298 468 ntBASIC12.98□□□□□ -0.33
CD74P04233 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.98□□□□□ -0.33
CD74P04233 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.98□□□□□ -0.33
CD74P04233 AC097376.2-205ENST00000610159 5334 ntBASIC12.98□□□□□ -0.33
CD74P04233 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CD74P04233 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 DGCR9-201ENST00000609630 2415 ntBASIC12.98□□□□□ -0.33
CD74P04233 CICP8-201ENST00000455800 2813 ntBASIC12.98□□□□□ -0.33
CD74P04233 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD74P04233 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms