Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 AC026954.1-201ENST00000429771 1293 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.51□□□□□ -0.09
PDGFAP04085 AL355864.2-201ENST00000447420 863 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.51□□□□□ -0.09
PDGFAP04085 VDAC1P7-201ENST00000462417 847 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFAP04085 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFAP04085 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.51□□□□□ -0.09
PDGFAP04085 AC120045.2-201ENST00000567334 178 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 MIR3615-201ENST00000581999 87 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 AC103810.3-201ENST00000583567 96 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 AL049840.4-201ENST00000602422 811 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PDGFAP04085 AL137784.3-201ENST00000623858 2288 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 AC092171.3-201ENST00000610122 2651 ntBASIC14.51□□□□□ -0.09
PDGFAP04085 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFAP04085 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PDGFAP04085 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFAP04085 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PDGFAP04085 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFAP04085 BAATP1-201ENST00000412284 1225 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 TOMM22P5-201ENST00000416399 439 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 RPL13AP20-201ENST00000459725 609 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFAP04085 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFAP04085 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFAP04085 AC243960.2-201ENST00000600996 747 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 AC005252.2-201ENST00000624630 1141 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 HLA-A-202ENST00000376806 1854 ntBASIC14.5□□□□□ -0.09
PDGFAP04085 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PDGFAP04085 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFAP04085 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFAP04085 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDGFAP04085 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PDGFAP04085 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms