Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 KRT8P37-201ENST00000451609 1420 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 MIR943-201ENST00000401286 94 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 AC055876.3-201ENST00000431496 288 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 INGX-202ENST00000489074 768 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.8■□□□□ 0.12
MT-ND3P03897 DUX4L27-201ENST00000554796 1261 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 AC138649.4-201ENST00000612222 287 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MT-ND3P03897 AL359258.3-201ENST00000622910 2331 ntBASIC15.8■□□□□ 0.12
MT-ND3P03897 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.8■□□□□ 0.12
MT-ND3P03897 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MT-ND3P03897 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
MT-ND3P03897 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 FOXO1B-201ENST00000504678 1527 ntBASIC15.79■□□□□ 0.12
MT-ND3P03897 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 ST20-AS1-201ENST00000560255 4223 ntBASIC15.79■□□□□ 0.12
MT-ND3P03897 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-ND3P03897 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.79■□□□□ 0.12
MT-ND3P03897 RNA5SP410-201ENST00000516285 106 ntBASIC15.79■□□□□ 0.12
MT-ND3P03897 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.79■□□□□ 0.12
MT-ND3P03897 AP000842.3-202ENST00000569238 1080 ntBASIC15.79■□□□□ 0.12
MT-ND3P03897 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-ND3P03897 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.79■□□□□ 0.12
MT-ND3P03897 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
MT-ND3P03897 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-ND3P03897 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
MT-ND3P03897 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-ND3P03897 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms