Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.84□□□□□ -0.19
APOA1P02647 AC093724.1-201ENST00000448659 1027 ntBASIC13.84□□□□□ -0.19
APOA1P02647 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.84□□□□□ -0.19
APOA1P02647 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 AC074051.2-201ENST00000565115 352 ntBASIC13.84□□□□□ -0.19
APOA1P02647 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 AP001269.4-201ENST00000609611 512 ntBASIC13.84□□□□□ -0.19
APOA1P02647 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
APOA1P02647 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
APOA1P02647 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.83□□□□□ -0.19
APOA1P02647 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOA1P02647 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOA1P02647 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOA1P02647 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
APOA1P02647 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.83□□□□□ -0.19
APOA1P02647 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
APOA1P02647 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 AC152010.1-201ENST00000415779 2006 ntBASIC13.83□□□□□ -0.2
APOA1P02647 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 TSSC2-201ENST00000450217 709 ntBASIC13.83□□□□□ -0.2
APOA1P02647 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.83□□□□□ -0.2
APOA1P02647 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.83□□□□□ -0.2
APOA1P02647 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
APOA1P02647 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
APOA1P02647 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
APOA1P02647 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
APOA1P02647 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.82□□□□□ -0.2
APOA1P02647 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
APOA1P02647 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms