Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LTN1O94822 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.92■□□□□ 0.78
LTN1O94822 AC084018.2-201ENST00000613093 2607 ntBASIC19.91■□□□□ 0.78
LTN1O94822 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.91■□□□□ 0.78
LTN1O94822 OR2R1P-201ENST00000441404 914 ntBASIC19.91■□□□□ 0.78
LTN1O94822 AC019193.1-201ENST00000506678 823 ntBASIC19.91■□□□□ 0.78
LTN1O94822 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.91■□□□□ 0.78
LTN1O94822 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LTN1O94822 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.91■□□□□ 0.78
LTN1O94822 NPM1P43-201ENST00000558669 786 ntBASIC19.91■□□□□ 0.78
LTN1O94822 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
LTN1O94822 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.91■□□□□ 0.78
LTN1O94822 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
LTN1O94822 AC136759.1-202ENST00000530858 2194 ntBASIC19.91■□□□□ 0.78
LTN1O94822 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LTN1O94822 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LTN1O94822 C18orf15-201ENST00000623680 2534 ntBASIC19.91■□□□□ 0.78
LTN1O94822 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 MROH4P-201ENST00000431302 1578 ntBASIC19.9■□□□□ 0.78
LTN1O94822 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 AC131206.1-201ENST00000538078 1211 ntBASIC19.9■□□□□ 0.78
LTN1O94822 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 AC051619.9-201ENST00000623237 597 ntBASIC19.9■□□□□ 0.78
LTN1O94822 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
LTN1O94822 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LTN1O94822 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 OR2K2-202ENST00000374428 1038 ntBASIC19.9■□□□□ 0.78
LTN1O94822 PUDPP3-201ENST00000445368 636 ntBASIC19.9■□□□□ 0.78
LTN1O94822 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.9■□□□□ 0.78
LTN1O94822 CICP12-201ENST00000455801 843 ntBASIC19.9■□□□□ 0.78
LTN1O94822 RBM8B-201ENST00000555532 525 ntBASIC19.9■□□□□ 0.78
LTN1O94822 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.9■□□□□ 0.78
LTN1O94822 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.9■□□□□ 0.78
LTN1O94822 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LTN1O94822 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.89■□□□□ 0.78
LTN1O94822 AC020658.6-201ENST00000623564 1870 ntBASIC19.89■□□□□ 0.78
LTN1O94822 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
LTN1O94822 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LTN1O94822 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.89■□□□□ 0.78
LTN1O94822 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
LTN1O94822 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
LTN1O94822 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
LTN1O94822 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.89■□□□□ 0.77
LTN1O94822 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LTN1O94822 RPL17P45-201ENST00000586289 509 ntBASIC19.89■□□□□ 0.77
LTN1O94822 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.89■□□□□ 0.77
LTN1O94822 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.89■□□□□ 0.77
LTN1O94822 AC006453.1-201ENST00000636037 1257 ntBASIC19.89■□□□□ 0.77
LTN1O94822 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
LTN1O94822 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LTN1O94822 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LTN1O94822 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms