Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
FOXN1O15353 CROCCP1-201ENST00000426910 5675 ntBASIC18.36■□□□□ 0.53
FOXN1O15353 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FOXN1O15353 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
FOXN1O15353 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FOXN1O15353 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXN1O15353 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXN1O15353 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXN1O15353 AC234782.1-201ENST00000451950 919 ntBASIC18.36■□□□□ 0.53
FOXN1O15353 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXN1O15353 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FOXN1O15353 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXN1O15353 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN1O15353 AP003392.6-201ENST00000607709 325 ntBASIC18.36■□□□□ 0.53
FOXN1O15353 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.36■□□□□ 0.53
FOXN1O15353 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.36■□□□□ 0.53
FOXN1O15353 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 AC092384.3-202ENST00000564646 2873 ntBASIC18.35■□□□□ 0.53
FOXN1O15353 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 RPSAP31-201ENST00000416648 895 ntBASIC18.35■□□□□ 0.53
FOXN1O15353 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.35■□□□□ 0.53
FOXN1O15353 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.35■□□□□ 0.53
FOXN1O15353 FGFR3P1-201ENST00000449999 601 ntBASIC18.35■□□□□ 0.53
FOXN1O15353 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 CTBP2P4-201ENST00000513884 920 ntBASIC18.35■□□□□ 0.53
FOXN1O15353 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 AF254983.2-201ENST00000612331 135 ntBASIC18.35■□□□□ 0.53
FOXN1O15353 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
FOXN1O15353 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXN1O15353 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FOXN1O15353 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXN1O15353 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
FOXN1O15353 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FOXN1O15353 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FOXN1O15353 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
FOXN1O15353 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXN1O15353 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXN1O15353 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.34■□□□□ 0.53
FOXN1O15353 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXN1O15353 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 AC007663.3-201ENST00000609632 465 ntBASIC18.34■□□□□ 0.53
FOXN1O15353 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms