Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 MARK2P16-201ENST00000605714 1723 ntBASIC20.76■□□□□ 0.91
CHD2O14647 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 AL359258.3-201ENST00000622910 2331 ntBASIC20.76■□□□□ 0.91
CHD2O14647 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHD2O14647 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHD2O14647 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD2O14647 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.76■□□□□ 0.91
CHD2O14647 AC007326.1-201ENST00000604539 458 ntBASIC20.76■□□□□ 0.91
CHD2O14647 RNF146-211ENST00000609447 607 ntTSL 4 BASIC20.76■□□□□ 0.91
CHD2O14647 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CHD2O14647 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD2O14647 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD2O14647 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD2O14647 TMBIM7P-202ENST00000641474 1516 ntBASIC20.75■□□□□ 0.91
CHD2O14647 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD2O14647 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 HLA-DMA-203ENST00000395305 777 ntBASIC20.75■□□□□ 0.91
CHD2O14647 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD2O14647 BCAS2P2-201ENST00000425064 674 ntBASIC20.75■□□□□ 0.91
CHD2O14647 AC131206.1-201ENST00000538078 1211 ntBASIC20.75■□□□□ 0.91
CHD2O14647 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD2O14647 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.75■□□□□ 0.91
CHD2O14647 AP001184.1-201ENST00000637936 376 ntBASIC20.75■□□□□ 0.91
CHD2O14647 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD2O14647 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 AC024909.3-201ENST00000611513 2257 ntBASIC20.75■□□□□ 0.91
CHD2O14647 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD2O14647 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD2O14647 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 AC092127.1-201ENST00000567093 3455 ntBASIC20.74■□□□□ 0.91
CHD2O14647 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.74■□□□□ 0.91
CHD2O14647 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD2O14647 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD2O14647 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 MIR4472-1-201ENST00000584349 80 ntBASIC20.74■□□□□ 0.91
CHD2O14647 EIF5AP2-201ENST00000585668 1047 ntBASIC20.74■□□□□ 0.91
CHD2O14647 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 AL603832.2-201ENST00000566195 2125 ntBASIC20.74■□□□□ 0.91
CHD2O14647 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD2O14647 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD2O14647 AHCYP4-201ENST00000419201 1315 ntBASIC20.74■□□□□ 0.91
CHD2O14647 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD2O14647 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD2O14647 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHD2O14647 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD2O14647 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD2O14647 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD2O14647 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 HLA-DQB1-202ENST00000399079 1501 ntBASIC20.73■□□□□ 0.91
CHD2O14647 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHD2O14647 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD2O14647 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 COX20P1-201ENST00000366529 357 ntBASIC20.73■□□□□ 0.91
CHD2O14647 DPY19L2P5-201ENST00000456300 331 ntBASIC20.73■□□□□ 0.91
CHD2O14647 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.73■□□□□ 0.91
CHD2O14647 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD2O14647 AC007952.4-201ENST00000573866 637 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms