Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 RNA5SP359-201ENST00000364838 113 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 OR2R1P-201ENST00000441404 914 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 PUDPP3-201ENST00000445368 636 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 SCARNA21-201ENST00000517026 139 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AL109837.1-201ENST00000603272 613 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AC133540.1-201ENST00000620845 1019 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AC020658.6-201ENST00000623564 1870 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 AC073352.2-201ENST00000609385 439 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LOC285556D6RIA3 DOC2GP-204ENST00000639052 2548 ntBASIC17.17■□□□□ 0.34
LOC285556D6RIA3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AC136759.1-202ENST00000530858 2194 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AL355334.1-201ENST00000417713 215 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 RBM8B-201ENST00000555532 525 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AC026803.1-201ENST00000569130 274 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 LINC01165-201ENST00000445190 1623 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 FRMPD2B-201ENST00000431305 1347 ntBASIC17.16■□□□□ 0.34
LOC285556D6RIA3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LOC285556D6RIA3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.15■□□□□ 0.34
LOC285556D6RIA3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 RN7SL8P-201ENST00000461771 266 ntBASIC17.15■□□□□ 0.34
LOC285556D6RIA3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 BX088702.1-201ENST00000610784 235 ntBASIC17.15■□□□□ 0.34
LOC285556D6RIA3 AC007718.1-201ENST00000621078 280 ntBASIC17.15■□□□□ 0.34
LOC285556D6RIA3 AL805961.1-201ENST00000642026 753 ntBASIC17.15■□□□□ 0.34
LOC285556D6RIA3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LOC285556D6RIA3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 429.5 ms