Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SPTLC1P1-201ENST00000447199 261 ntBASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 VDAC1P7-201ENST00000462417 847 ntBASIC13.62□□□□□ -0.23
NPIPB4C9JG80 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 AC093726.1-201ENST00000608064 963 ntBASIC13.62□□□□□ -0.23
NPIPB4C9JG80 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 AC007431.3-201ENST00000623221 587 ntBASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 INTS4P2-202ENST00000614726 2019 ntBASIC13.62□□□□□ -0.23
NPIPB4C9JG80 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AL158070.2-201ENST00000623713 1621 ntBASIC13.61□□□□□ -0.23
NPIPB4C9JG80 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 INGX-202ENST00000489074 768 ntBASIC13.61□□□□□ -0.23
NPIPB4C9JG80 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AC120045.2-201ENST00000567334 178 ntBASIC13.61□□□□□ -0.23
NPIPB4C9JG80 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPB4C9JG80 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms