Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 SCARNA2-201ENST00000458748 420 ntBASIC13.46□□□□□ -0.25
HMX3A6NHT5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HMX3A6NHT5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 AC131009.4-201ENST00000624048 1740 ntBASIC13.46□□□□□ -0.25
HMX3A6NHT5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HMX3A6NHT5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HMX3A6NHT5 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.46□□□□□ -0.26
HMX3A6NHT5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMX3A6NHT5 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AL645939.2-201ENST00000427340 991 ntBASIC13.45□□□□□ -0.26
HMX3A6NHT5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AC021087.4-201ENST00000563761 564 ntBASIC13.45□□□□□ -0.26
HMX3A6NHT5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
HMX3A6NHT5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMX3A6NHT5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 AC019294.4-201ENST00000561777 2905 ntBASIC13.44□□□□□ -0.26
HMX3A6NHT5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMX3A6NHT5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.44□□□□□ -0.26
HMX3A6NHT5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms