Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AP3S2-216ENST00000617003 1561 ntBASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AL592309.1-201ENST00000443127 649 ntBASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 KRT8P48-201ENST00000515599 1220 ntBASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HTR3EA5X5Y0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
HTR3EA5X5Y0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 AL136982.4-201ENST00000437689 1740 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 RPL5P21-201ENST00000404620 815 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 AC023274.1-201ENST00000418278 595 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 AC136604.1-201ENST00000418535 575 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 AL353705.2-201ENST00000428243 662 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 RARRES2P9-201ENST00000565168 469 ntBASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HTR3EA5X5Y0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms