Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AC126755.1-201ENST00000525846 6405 ntBASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 CICP8-201ENST00000455800 2813 ntBASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 HLA-H-201ENST00000383620 1096 ntBASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AKAP8P1-201ENST00000434743 1349 ntBASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 AL354702.1-201ENST00000442006 1960 ntBASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TCRBV3S1A0A5B6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms