Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AL008707.1-201ENST00000422498 534 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AC016700.1-201ENST00000429424 312 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 RN7SL769P-201ENST00000469386 295 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CU633904.3-201ENST00000624042 1029 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AC103702.1-201ENST00000548801 2630 ntBASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC187A0A096LP49 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC022188.1-201ENST00000620960 1664 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 MTHFR-217ENST00000641820 1569 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 POM121L8P-201ENST00000417732 1281 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 EIF3FP3-201ENST00000434851 1086 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 POM121L9P-203ENST00000441984 1285 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AL133466.1-201ENST00000447582 150 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC044849.1-201ENST00000519737 1188 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC073413.1-201ENST00000603927 732 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC091812.3-201ENST00000621362 345 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AL645728.2-202ENST00000641679 227 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 DOC2GP-204ENST00000639052 2548 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 AC006449.5-201ENST00000610658 2098 ntBASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC187A0A096LP49 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms