Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PER1-202ENST00000354903 3115 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
LINC01558Q9Y6Z2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC097374.2-201ENST00000618617 1306 ntBASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 NME4-202ENST00000382940 766 ntTSL 3 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 UBE2SP1-201ENST00000450587 669 ntBASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 MIR4449-201ENST00000578365 66 ntBASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AC120498.8-201ENST00000614275 531 ntBASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 OR10C1-204ENST00000622521 1039 ntBASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LINC01558Q9Y6Z2 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms