Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 MEP1AP4-201ENST00000423244 1087 ntBASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 MTND2P39-201ENST00000457230 764 ntBASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PKD1P5-201ENST00000532415 10291 ntBASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 AC138035.3-201ENST00000622706 2791 ntBASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 AC112693.3-201ENST00000624819 1983 ntBASIC17.19■□□□□ 0.34
PCDHB13Q9Y5F0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 C18orf15-201ENST00000623680 2534 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 SPDYE19P-201ENST00000338590 713 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AL121949.1-201ENST00000402043 968 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 BCRP1-201ENST00000444246 691 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AC082651.2-201ENST00000496833 166 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TPRX2P-201ENST00000535362 881 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 RARRES2P5-201ENST00000564013 466 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AC000095.1-201ENST00000603208 874 ntBASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHB13Q9Y5F0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB13Q9Y5F0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms