Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 MYO15B-237ENST00000642007 4893 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 AC024909.3-201ENST00000611513 2257 ntBASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PFN1P12-201ENST00000455938 534 ntBASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 GNRHR2-203ENST00000581100 1187 ntBASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PRAL-201ENST00000624952 3286 ntBASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.81■□□□□ 0.44
CTDP1Q9Y5B0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 AL603832.2-201ENST00000566195 2125 ntBASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 KLF2P2-201ENST00000416807 1039 ntBASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 FAM197Y7-201ENST00000432892 766 ntBASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTDP1Q9Y5B0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTDP1Q9Y5B0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.79■□□□□ 0.44
CTDP1Q9Y5B0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTDP1Q9Y5B0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTDP1Q9Y5B0 OR2I1P-209ENST00000641730 5365 ntBASIC17.79■□□□□ 0.44
CTDP1Q9Y5B0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms