Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
DTX4Q9Y2E6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 MROH4P-201ENST00000431302 1578 ntBASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 KRT8P22-201ENST00000562317 1415 ntBASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 SAMD11P1-201ENST00000571429 661 ntBASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DTX4Q9Y2E6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 REXO1L2P-201ENST00000425429 2069 ntBASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 AC093525.8-201ENST00000624099 1342 ntBASIC14.27□□□□□ -0.12
DTX4Q9Y2E6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 SOCS2P1-201ENST00000417727 557 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AC133539.2-201ENST00000604757 467 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 RPSAP52-203ENST00000622976 1023 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 LINC00528-201ENST00000600723 2160 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AGAP7P-201ENST00000582299 2062 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 AGAP14-201ENST00000624701 2060 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms