Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TARDBPP1-201ENST00000442013 1203 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ACTG1P14-201ENST00000446382 1122 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 POLD2P1-201ENST00000511220 997 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AC022145.2-201ENST00000598203 171 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AC003101.2-201ENST00000612557 442 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 AC055717.3-201ENST00000622967 595 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 MTHFR-210ENST00000641407 2387 ntBASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HDHD3Q9BSH5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HDHD3Q9BSH5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.08□□□□□ -0.31
HDHD3Q9BSH5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HDHD3Q9BSH5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
HDHD3Q9BSH5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 KRT18P32-201ENST00000424695 1287 ntBASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 FAM8A3P-201ENST00000427218 844 ntBASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 PGAM5P1-201ENST00000518923 814 ntBASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC018529.1-201ENST00000613063 361 ntBASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HDHD3Q9BSH5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
HDHD3Q9BSH5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms