Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.64□□□□□ -0.07
NSMCE2Q96MF7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NSMCE2Q96MF7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NSMCE2Q96MF7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AC138969.2-201ENST00000532739 9932 ntBASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AC074386.1-202ENST00000463561 864 ntBASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AP002472.1-201ENST00000577490 586 ntBASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 AP000845.1-201ENST00000581677 2131 ntBASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
NSMCE2Q96MF7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 C8orf49-201ENST00000525043 1968 ntBASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 HLA-H-201ENST00000383620 1096 ntBASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 AZGP1P1-201ENST00000411909 902 ntBASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 IGHV3-22-201ENST00000520721 359 ntBASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 AC136759.1-202ENST00000530858 2194 ntBASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NSMCE2Q96MF7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms