Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC087481.3-201ENST00000602886 1894 ntBASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 KRT8P44-201ENST00000441609 1350 ntBASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AL645937.2-201ENST00000396808 931 ntBASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CNN2P8-201ENST00000421872 913 ntBASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC009542.2-202ENST00000619004 1067 ntBASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.21■□□□□ 0.35
ATP6V0A1Q93050 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ATP6V0A1Q93050 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP6V0A1Q93050 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.21■□□□□ 0.34
ATP6V0A1Q93050 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.21■□□□□ 0.34
ATP6V0A1Q93050 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 PFN1P12-201ENST00000455938 534 ntBASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AC108725.1-201ENST00000495472 409 ntBASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AC025279.2-201ENST00000569730 653 ntBASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 SAMD11P1-201ENST00000571429 661 ntBASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 AC008687.7-202ENST00000637404 953 ntBASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.2■□□□□ 0.34
ATP6V0A1Q93050 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ATP6V0A1Q93050 AC007787.1-201ENST00000588095 1583 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms