Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MESTP3-201ENST00000503460 968 ntBASIC18.82■□□□□ 0.6
RPGRQ92834 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.82■□□□□ 0.6
RPGRQ92834 AC013355.1-201ENST00000562625 723 ntBASIC18.82■□□□□ 0.6
RPGRQ92834 AC100757.4-201ENST00000626934 759 ntBASIC18.82■□□□□ 0.6
RPGRQ92834 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RPGRQ92834 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPGRQ92834 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RPGRQ92834 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 HLA-K-203ENST00000430151 1046 ntBASIC18.81■□□□□ 0.6
RPGRQ92834 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.81■□□□□ 0.6
RPGRQ92834 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 AC134698.3-201ENST00000523880 214 ntBASIC18.81■□□□□ 0.6
RPGRQ92834 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.81■□□□□ 0.6
RPGRQ92834 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.81■□□□□ 0.6
RPGRQ92834 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.81■□□□□ 0.6
RPGRQ92834 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.81■□□□□ 0.6
RPGRQ92834 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.81■□□□□ 0.6
RPGRQ92834 AC026740.1-201ENST00000607068 791 ntBASIC18.81■□□□□ 0.6
RPGRQ92834 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.81■□□□□ 0.6
RPGRQ92834 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RPGRQ92834 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPGRQ92834 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.81■□□□□ 0.6
RPGRQ92834 AC008132.1-202ENST00000342005 1389 ntBASIC18.81■□□□□ 0.6
RPGRQ92834 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 FKBP4P6-201ENST00000457486 1332 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 REXO1L5P-201ENST00000622260 2098 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RPGRQ92834 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 RPL5P21-201ENST00000404620 815 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.8■□□□□ 0.6
RPGRQ92834 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.8■□□□□ 0.6
RPGRQ92834 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.8■□□□□ 0.6
RPGRQ92834 MAGEA5-201ENST00000446757 942 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 DUX4L47-201ENST00000566374 394 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 MIR4722-201ENST00000578292 60 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 BNIP3P13-201ENST00000599968 566 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.8■□□□□ 0.6
RPGRQ92834 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.8■□□□□ 0.6
RPGRQ92834 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RPGRQ92834 MIR6727-201ENST00000620702 65 ntBASIC18.8■□□□□ 0.6
RPGRQ92834 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
RPGRQ92834 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPGRQ92834 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RPGRQ92834 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPGRQ92834 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.8■□□□□ 0.6
RPGRQ92834 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms