Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AC055811.4-201ENST00000624039 1754 ntBASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CKAP2Q8WWK9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 MIR600HG-201ENST00000449175 5984 ntBASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AZGP1P1-201ENST00000411909 902 ntBASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 CRYGEP-201ENST00000412192 528 ntBASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 IFNL4P1-201ENST00000607083 540 ntBASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 AC012508.2-201ENST00000567613 1472 ntBASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CKAP2Q8WWK9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TCAF1P1-201ENST00000414990 2232 ntBASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AC004870.1-201ENST00000315132 882 ntBASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 RNA5SP410-201ENST00000516285 106 ntBASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AC023090.2-201ENST00000625182 2110 ntBASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 SBF1P1-201ENST00000444527 5631 ntBASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.36■□□□□ 0.05
CKAP2Q8WWK9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.35■□□□□ 0.05
CKAP2Q8WWK9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
CKAP2Q8WWK9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CKAP2Q8WWK9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.35■□□□□ 0.05
CKAP2Q8WWK9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms