Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 OR6D1P-203ENST00000641209 4860 ntBASIC13.81□□□□□ -0.2
RNF138Q8WVD3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF138Q8WVD3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 FAM197Y7-201ENST00000432892 766 ntBASIC13.8□□□□□ -0.2
RNF138Q8WVD3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.8□□□□□ -0.2
RNF138Q8WVD3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 AL354718.3-201ENST00000616414 581 ntBASIC13.8□□□□□ -0.2
RNF138Q8WVD3 CR382287.1-201ENST00000623954 586 ntBASIC13.8□□□□□ -0.2
RNF138Q8WVD3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 CLUHP2-201ENST00000426660 1303 ntBASIC13.8□□□□□ -0.2
RNF138Q8WVD3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF138Q8WVD3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 TLE1P1-201ENST00000422965 589 ntBASIC13.79□□□□□ -0.2
RNF138Q8WVD3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 AC078819.1-201ENST00000547454 765 ntBASIC13.79□□□□□ -0.2
RNF138Q8WVD3 AC012085.1-201ENST00000548270 765 ntBASIC13.79□□□□□ -0.2
RNF138Q8WVD3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 AC006453.4-201ENST00000636949 1252 ntBASIC13.79□□□□□ -0.2
RNF138Q8WVD3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF138Q8WVD3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms