Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AC010328.2-201ENST00000597698 1111 ntBASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AC008687.7-202ENST00000637404 953 ntBASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 CROCCP1-201ENST00000426910 5675 ntBASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MIR6787-201ENST00000616675 61 ntBASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 PRAL-201ENST00000624952 3286 ntBASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SHKBP1Q8TBC3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 FAM197Y7-201ENST00000432892 766 ntBASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 RPL13AP20-201ENST00000459725 609 ntBASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 KRT18P25-201ENST00000508931 1278 ntBASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 AC145423.3-201ENST00000615987 467 ntBASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms